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Inference algorithms for gene networks: a statistical mechanics analysis. Journal of Statistical Mechanics: Theory and Experiment. 2008;2008:P12001 (29pp).
Core Percolation and Onset of Complexity in Boolean Networks. Physical Review Letters. 2006;96:18101.
Ising model on the edge-dual of random networks. Physical Review E. 2004;69:66114.
Analysis of nonlinear oscillatory network dynamics, via time-varying amplitude and phase variables. International Journal of Circuit Theory and Applications. 2007;35:623-44.
Construction and VHDL implementation of a fully local network with good reconstruction properties of the inputs. Artificial Intelligence and Knowledge Engineering Applications: a Bioinspired approach, J. Mira, JR Alvarez editors, Part II. 2005:385-94.
Optimal equilibria of the best shot game. Journal of Public Economic Theory. 2011;13(6).
Statistical Mechanics of Steiner Trees. Physical Review Letters. 2008;101:37208.
Biology helps to construct weighted scale-free networks. Europhysics Letters. 2004;68:316-22.
Exogenous control of vascular network formation in vitro: a mathematical model. NETWORKS AND HETEROGENEOUS MEDIA. 2006;1:621.
Estimating the size of the solution space of metabolic networks. BMC Bioinformatics. 2008;9:240.
A Prize-Collecting Steiner Tree Approach for Transduction Network Inference. In: Proceedings of the 7th International Conference on Computational Methods in Systems Biology. Springer; 2009. 95.
Propagation of external regulation and asynchronous dynamics in random Boolean networks. Chaos: An Interdisciplinary Journal of Nonlinear Science. 2007;17:026109.
Investigation of a protein complex network. The European Physical Journal B-Condensed Matter and Complex Systems. 2004;41:113-21.
Elastic properties of small-world spring networks. Physical Review E. 2005;72:66115.
Learning by message-passing in networks of discrete synapses. Phys. Rev. Lett.. 2006;96:030201.
Correlation effects in a simple model of small-world network. Journal reference: Phys. Rev. E. 2002;65:036122.
A rigorous analysis of the cavity equations for the minimum spanning tree. Journal of Mathematical Physics. 2008;49:125206.
Simple models of small-world networks with directed links. Physical Review E. 2002;66:36128.
Collaboration in social networks. Proceedings of the National Academy of Sciences. 2012;109:4395-400.
Intermittent exploration on a scale-free network. EPL. 2007;77:60004.
The computational core and fixed point organization in Boolean networks. Journal of Statistical Mechanics: Theory and Experiment. 2006;3:P03002.
Generating correlated networks from uncorrelated ones. Physical Review E. 2003;67:46107.
On the study of cellular nonlinear networks via amplitude and phase dynamics. Neural Networks. 2008;21:122-9.
Efficient supervised learning in networks with binary synapses. Proceedings of the National Academy of Sciences. 2007;104:11079-84.
Statistical physics approach to graphical games: local and global interactions. Eur. Phys. J. B. 2011;81(3).