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Amoruso C
,
Marinari E
,
Martin OC
,
Pagnani A
.
Scalings of domain wall energies in two dimensional Ising spin glasses
. Physical review letters. 2003;91:87201.
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Pandey A
,
Kumar A
,
Purohit R
.
Sequencing Closterium moniliferum: Future prospects in nuclear waste disposal
. Egyptian Journal of Medical Human Genetics. 2013;14:113-5.
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Ramezanpour A
,
Zecchina R
.
Sign problem in the Bethe approximation
. Phys. Rev. B . 2012;86.
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Zamparo M
,
Trovato A
,
Maritan A
.
Simplified Exactly Solvable Model for $$\beta$$-Amyloid Aggregation
. Phys. Rev. Lett.. 2010;105:108102.
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Ramezanpour A
,
Moghimi-Araghi S
.
Simplifying random satisfiability problems by removing frustrating interactions
. Physical Review E. 2006;74:41105.
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Tuncbag N
,
Braunstein A
,
Pagnani A
,
Huang S-
,
Chayes J
,
Borgs C
, et al.
Simultaneous Reconstruction of Multiple Signaling Pathways via the Prize-Collecting Steiner Forest Problem
. In:
Chor B
, editor. Research in Computational Molecular Biology. Vol 7262. Springer Berlin Heidelberg; 2012. p. 287-301. (Lecture Notes in Computer Science; vol 7262).
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Battaglia D
,
Braunstein A
,
Chavas J
,
Zecchina R
.
Source coding by efficient selection of ground-state clusters.
Phys Rev E. Stat Nonlin Soft Matter Phys. 2005;72:015103.
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Braunstein A
,
Mulet R
,
Pagnani A
.
The space of feasible solutions in metabolic networks
. In: Journal of Physics: Conference Series. Vol 95. IOP Publishing; 2008. 012017.
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Marinari E
,
Martin-Mayor V
,
Pagnani A
.
Spin-glass ordering in diluted magnetic semiconductors: A Monte Carlo study
. Physical Review B. 2000;62:4999-5002.
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Corinto F
,
Lanza V
,
Gilli M
.
Spiral waves in bio-inspired oscillatory dissipative media
. International Journal of Circuit Theory and Applications. 2008;36:555-71.
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Zhang P
,
Zeng Y
,
Zhou H
.
Stability analysis on the finite-temperature replica-symmetric and first-step replica-symmetry-broken cavity solutions of the random vertex cover problem
. Phys. Rev. E. 2009;80:021122.
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Pretti M
,
Pelizzola A
.
Stable propagation algorithm for the minimization of the Bethe free energy
. JOURNAL OF PHYSICS A-MATHEMATICAL AND GENERAL. 2003;36:11201-11.
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Altarelli F
,
Braunstein A
,
Realpe-Gomez J
,
Zecchina R
.
Statistical mechanics of budget-constrained auctions
. Journal of Statistical Mechanics: Theory and Experiment. 2009;2009:P07002 (27pp).
Abstract
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Dall'Asta L
,
Pin P
,
Ramezanpour A
.
Statistical Mechanics of Maximal Independent Sets
. Phys. Rev. E . 2009;80.
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Lage-Castellanos A
,
Pagnani A
,
Weigt M
.
Statistical mechanics of sparse generalization and graphical model selection
. Journal of Statistical Mechanics: Theory and Experiment. 2009;2009:P10009.
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Bayati M
,
Borgs C
,
Braunstein A
,
Chayes J
,
Ramezanpour A
,
Zecchina R
.
Statistical Mechanics of Steiner Trees
. Physical Review Letters. 2008;101:37208.
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Download:
prl-steiner.pdf
(210.2 KB)
Ramezanpour A
,
Realpe J
,
Zecchina R
.
Statistical physics approach to graphical games: local and global interactions
. Eur. Phys. J. B. 2011;81(3).
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Zecchina R
.
Statistical physics, optimization and source coding
. Pramana. 2005;64:1161-73.
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Tria F
,
Caglioti E
,
Loreto V
,
Pagnani A
.
A Stochastic Local Search algorithm for distance-based phylogeny reconstruction
. Molecular Biology and Evolution. 2010.
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Tria F
,
Caglioti E
,
Loreto V
,
Pagnani A
.
A stochastic local search approach to language tree reconstruction
. Diachronica. 2010;27:341-58.
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Altarelli F
,
Braunstein A
,
Ramezanpour A
,
Zecchina R
.
Stochastic Matching Problem
. Phys. Rev. Lett.. 2011;106:190601.
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Altarelli F
,
Braunstein A
,
Ramezanpour A
,
Zecchina R
.
Stochastic optimization by message passing
. JOURNAL OF STATISTICAL MECHANICS: THEORY AND EXPERIMENT. 2011;2011.
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De Martini F
,
Mataloni P
,
Di Giuseppe G
,
Altarelli F
.
Stochastic quantum interferometry with Fock states
. J. Opt. Soc. Am. B. 2002;19:1009-18.
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Purohit R
,
Sethumadhavan R
.
Structural basis for the resilience of Darunavir (TMC114) resistance major flap mutations of HIV-1 protease
. Interdisciplinary Sciences: Computational Life Sciences. 2009;1:320-8.
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Gulati G
,
Gaonkar KS
,
kamraj B
,
Kumar A
,
Purohit R
.
Structure based energy calculation to determine the regulation of G protein signalling by RGS and RGS-G protein interaction specificity
. Interdisciplinary Sciences: Computational Life Sciences. 2012;4:173-82.
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