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Multivariate Gaussian Inference of Protein Contacts from Multiple Sequence Alignment

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gauss.tar_.gz	21.9 KB

This archive file provides the MATLAB functions which read a multiple sequence alignment (in FASTA format) and return a direct-information (DI) matrix between all pairs of positions in the aligned amino-acid sequences, using a multivariate Gaussian model.

By apa at 03/05/2013 - 11:00
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A rigorous analysis of the cavity equations for the minimum spanning tree

Bayati M, Braunstein A, Zecchina R. A rigorous analysis of the cavity equations for the minimum spanning tree. Journal of Mathematical Physics. 2008;49:125206.

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BaBrZe2008.pdf: Copyright (2008) American Institute of Physics. This article may be downloaded for personal use only. Any other use requires prior permission of the author and the American Institute of Physics.	270.23 KB

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