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Folding transitions in three-dimensional space with defects. Nuclear Physics B. 2012;862:821-34.
Direction-dependent mechanical unfolding and green fluorescent protein as a force sensor. Phys. Rev. E. 2011;84:021918.
Palette-colouring: a belief propagation approach. Journal of Statistical Mechanics: Theory and Experiment. 2011;2011:P05010.
Equilibrium Properties and Force-Driven Unfolding Pathways of RNA Molecules. Phys. Rev. Lett.. 2009;103:188102.
Fluctuation relations in non-equilibrium stationary states of Ising models. Journal of Statistical Mechanics-Theory and Experiment. 2009.
Nearly symmetrical proteins: Folding pathways and transition states. The Journal of Chemical Physics. 2009;131:035101.
Nonequilibrium work fluctuations in a driven Ising model. Physica a-Statistical Mechanics and Its Applications. 2009;388:2815-20.
Computational protein design with side-chain conformational entropy. Proteins-Structure Function and Bioinformatics. 2009;74:176-91.
Rate Determining Factors in Protein Model Structures. Phys. Rev. Lett.. 2007;99:038103.
Ising-Like Model for Protein Mechanical Unfolding. Phys. Rev. Lett.. 2007;98:148102.
Downhill versus two-state protein folding in a statistical mechanical model. The Journal of Chemical Physics. 2007;126:215103.
Protein mechanical unfolding: A model with binary variables. The Journal of Chemical Physics. 2007;127:145105.
Kinetics of the Wako-Saitô-Muñoz-Eaton Model of Protein Folding. Phys. Rev. Lett.. 2006;97:068106.
Rigorous results on the local equilibrium kinetics of a protein folding model. Journal of Statistical Mechanics: Theory and Experiment. 2006;2006:P12009.
Cluster variation method in statistical physics and probabilistic graphical models. JOURNAL OF PHYSICS A-MATHEMATICAL AND GENERAL. 2005;38:R309-R339.
Exactness of the cluster variation method and factorization of the equilibrium probability for the Wako-Saito-Munoz-Eaton model of protein folding. JOURNAL OF STATISTICAL MECHANICS-THEORY AND EXPERIMENT. 2005:-.
Fluctuation mediated interaction and phase separation of nanoparticles in a liquid crystal solvent. PHYSICAL REVIEW LETTERS. 2003;91:-.
Stable propagation algorithm for the minimization of the Bethe free energy. JOURNAL OF PHYSICS A-MATHEMATICAL AND GENERAL. 2003;36:11201-11.
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Lattice model for polymer hydration: Collapse of poly(N-isopropylacrylamide). MACROMOLECULAR SYMPOSIA. 2002;181:261-73.
Exact solution of the Munoz-Eaton model for protein folding. PHYSICAL REVIEW LETTERS. 2002;88:-.